##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##reference=file:///usr/bio-ref/GRCh38.81/GRCh38.fa
##contig=<ID=1,length=248956422>
##INFO=<ID=overlap,Type=Flag,Number=0,Description="Marked by +remove-overlaps">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
1	100000	.	CC	G	.	.	overlap
1	100001	.	C	G	.	.	overlap
1	789241	.	C	G	.	.	.
1	789242	.	C	G	.	.	overlap
1	789242	.	C	A	.	.	overlap
1	789243	.	C	CA	.	.	.
1	789243	.	C	CCA	.	.	overlap
1	789244	.	C	A	.	.	overlap
1	789244	.	C	CA	.	.	overlap
1	789244	.	C	T	.	.	overlap
1	789244	.	C	CCA	.	.	overlap
1	789245	.	C	T,CA,TTT	.	.	overlap
1	789245	.	C	T,A	.	.	overlap
1	789245	.	C	T	.	.	overlap
1	789245	.	C	A,T	.	.	overlap
1	789245	.	C	T	.	.	overlap
1	789245	.	C	CA,TTT,T	.	.	overlap
1	790000	.	C	G	.	.	.
1	800000	.	CC	G	.	.	overlap
1	800001	.	C	G	.	.	overlap
1	900000	.	C	G	.	.	.
